Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.05■□□□□ 0.96
RtcbQ99LF4 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.05■□□□□ 0.96
RtcbQ99LF4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RtcbQ99LF4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RtcbQ99LF4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RtcbQ99LF4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.04■□□□□ 0.96
RtcbQ99LF4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Mir5131-201ENSMUST00000175426 93 ntBASIC21.03■□□□□ 0.96
RtcbQ99LF4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RtcbQ99LF4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.02■□□□□ 0.96
RtcbQ99LF4 Gm18421-201ENSMUST00000204122 625 ntBASIC21.02■□□□□ 0.96
RtcbQ99LF4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RtcbQ99LF4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RtcbQ99LF4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.01■□□□□ 0.95
RtcbQ99LF4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RtcbQ99LF4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RtcbQ99LF4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21■□□□□ 0.95
RtcbQ99LF4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
RtcbQ99LF4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Gm27867-201ENSMUST00000184778 125 ntBASIC21■□□□□ 0.95
RtcbQ99LF4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21■□□□□ 0.95
RtcbQ99LF4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21■□□□□ 0.95
RtcbQ99LF4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC21■□□□□ 0.95
RtcbQ99LF4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RtcbQ99LF4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RtcbQ99LF4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms