Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Mir5130-201ENSMUST00000175160 84 ntBASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb2Q91Y00 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Gm13474-201ENSMUST00000122466 815 ntBASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb2Q91Y00 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Gm16061-201ENSMUST00000122167 857 ntBASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Gm45058-201ENSMUST00000205810 766 ntBASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb2Q91Y00 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb2Q91Y00 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Gm18958-201ENSMUST00000174258 762 ntBASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Gm10231-201ENSMUST00000181584 441 ntBASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Gm10175-202ENSMUST00000208752 441 ntBASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb2Q91Y00 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms