Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb20Q91XZ9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.46■□□□□ 0.22
Pcdhb20Q91XZ9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb20Q91XZ9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb20Q91XZ9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb20Q91XZ9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 AC155266.1-201ENSMUST00000220762 904 ntBASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Rarb-207ENSMUST00000225921 2756 ntBASIC16.43■□□□□ 0.22
Pcdhb20Q91XZ9 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb20Q91XZ9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb20Q91XZ9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms