Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb8Q91XZ2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb8Q91XZ2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb8Q91XZ2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb8Q91XZ2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb8Q91XZ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Gm8520-201ENSMUST00000186517 868 ntBASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.62■□□□□ 0.25
Pcdhb8Q91XZ2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb8Q91XZ2 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb8Q91XZ2 Mir1199-201ENSMUST00000117015 119 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms