Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Gm23958-201ENSMUST00000157207 105 ntBASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Gm7889-201ENSMUST00000185591 958 ntBASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb17Q91VD8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb17Q91VD8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gm22885-201ENSMUST00000157410 107 ntBASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gm2274-201ENSMUST00000184539 609 ntBASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb17Q91VD8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb17Q91VD8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Gm14542-201ENSMUST00000118460 1248 ntBASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb17Q91VD8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Pcdhb17Q91VD8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb17Q91VD8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb17Q91VD8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb17Q91VD8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms