Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
StrcQ8VIM6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
StrcQ8VIM6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
StrcQ8VIM6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
StrcQ8VIM6 Gm13418-201ENSMUST00000119097 944 ntBASIC20.41■□□□□ 0.86
StrcQ8VIM6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.41■□□□□ 0.86
StrcQ8VIM6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
StrcQ8VIM6 Gm2756-201ENSMUST00000195851 400 ntBASIC20.41■□□□□ 0.86
StrcQ8VIM6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
StrcQ8VIM6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
StrcQ8VIM6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Auts2-212ENSMUST00000178555 309 ntBASIC20.4■□□□□ 0.86
StrcQ8VIM6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.4■□□□□ 0.86
StrcQ8VIM6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
StrcQ8VIM6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.39■□□□□ 0.86
StrcQ8VIM6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
StrcQ8VIM6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
StrcQ8VIM6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
StrcQ8VIM6 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.39■□□□□ 0.86
StrcQ8VIM6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
StrcQ8VIM6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Gm9727-201ENSMUST00000161387 555 ntBASIC20.39■□□□□ 0.85
StrcQ8VIM6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
StrcQ8VIM6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.39■□□□□ 0.85
StrcQ8VIM6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
StrcQ8VIM6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
StrcQ8VIM6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
StrcQ8VIM6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
StrcQ8VIM6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
StrcQ8VIM6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
StrcQ8VIM6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
StrcQ8VIM6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
StrcQ8VIM6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Gm24513-201ENSMUST00000174964 138 ntBASIC20.37■□□□□ 0.85
StrcQ8VIM6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.37■□□□□ 0.85
StrcQ8VIM6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Gm27628-201ENSMUST00000184911 107 ntBASIC20.37■□□□□ 0.85
StrcQ8VIM6 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.37■□□□□ 0.85
StrcQ8VIM6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
StrcQ8VIM6 Gm15590-201ENSMUST00000078419 552 ntBASIC20.37■□□□□ 0.85
StrcQ8VIM6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.36■□□□□ 0.85
StrcQ8VIM6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
StrcQ8VIM6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
StrcQ8VIM6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms