Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rprd1aQ8VDS4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rprd1aQ8VDS4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rprd1aQ8VDS4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rprd1aQ8VDS4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rprd1aQ8VDS4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Rprd1aQ8VDS4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rprd1aQ8VDS4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Rprd1aQ8VDS4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rprd1aQ8VDS4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Gm16061-201ENSMUST00000122167 857 ntBASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rprd1aQ8VDS4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms