Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Swsap1Q8VCI7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Swsap1Q8VCI7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.42■□□□□ 0.06
Swsap1Q8VCI7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Swsap1Q8VCI7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Swsap1Q8VCI7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Swsap1Q8VCI7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Timm23-208ENSMUST00000226683 750 ntBASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.41■□□□□ 0.06
Swsap1Q8VCI7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Gm30025-201ENSMUST00000218555 728 ntBASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Gm9987-201ENSMUST00000069768 567 ntBASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Swsap1Q8VCI7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Gm13401-201ENSMUST00000117074 291 ntBASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Gm43799-201ENSMUST00000201845 579 ntBASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Odf3b-204ENSMUST00000227834 930 ntBASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Swsap1Q8VCI7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Gm6433-201ENSMUST00000118634 875 ntBASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.38■□□□□ 0.05
Swsap1Q8VCI7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms