Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Gm18671-201ENSMUST00000214826 683 ntBASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup35Q8R4R6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup35Q8R4R6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Gm11643-201ENSMUST00000119578 864 ntBASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup35Q8R4R6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup35Q8R4R6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup35Q8R4R6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms