Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim29Q8R2Q0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Gm17661-201ENSMUST00000170317 270 ntBASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Trim29Q8R2Q0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim29Q8R2Q0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Gm715-201ENSMUST00000117865 831 ntBASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Gm38027-201ENSMUST00000192315 235 ntBASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim29Q8R2Q0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim29Q8R2Q0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms