Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zcchc9Q8R1J3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zcchc9Q8R1J3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Zcchc9Q8R1J3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Zcchc9Q8R1J3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Gm9731-201ENSMUST00000209480 747 ntBASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Zcchc9Q8R1J3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms