Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.72■□□□□ 0.27
Scamp1Q8K021 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scamp1Q8K021 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.71■□□□□ 0.27
Scamp1Q8K021 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Il3ra-202ENSMUST00000223589 738 ntBASIC16.71■□□□□ 0.27
Scamp1Q8K021 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Scamp1Q8K021 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scamp1Q8K021 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Rarb-207ENSMUST00000225921 2756 ntBASIC16.7■□□□□ 0.26
Scamp1Q8K021 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Gm13474-201ENSMUST00000122466 815 ntBASIC16.7■□□□□ 0.26
Scamp1Q8K021 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Gm21559-201ENSMUST00000220638 855 ntBASIC16.7■□□□□ 0.26
Scamp1Q8K021 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Gm8587-201ENSMUST00000076538 843 ntBASIC16.7■□□□□ 0.26
Scamp1Q8K021 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scamp1Q8K021 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Gm17661-201ENSMUST00000170317 270 ntBASIC16.69■□□□□ 0.26
Scamp1Q8K021 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scamp1Q8K021 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Gm18958-201ENSMUST00000174258 762 ntBASIC16.68■□□□□ 0.26
Scamp1Q8K021 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Scamp1Q8K021 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scamp1Q8K021 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms