Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm28Q8CGC6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm28Q8CGC6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Gm17661-201ENSMUST00000170317 270 ntBASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Mir8112-201ENSMUST00000184382 131 ntBASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Gm33142-201ENSMUST00000193913 867 ntBASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm28Q8CGC6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rbm28Q8CGC6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Mir1668-201ENSMUST00000184114 107 ntBASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rbm28Q8CGC6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rbm28Q8CGC6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gm21559-201ENSMUST00000220638 855 ntBASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gm8587-201ENSMUST00000076538 843 ntBASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rbm28Q8CGC6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rbm28Q8CGC6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.11■□□□□ 0.81
Rbm28Q8CGC6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rbm28Q8CGC6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rbm28Q8CGC6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rbm28Q8CGC6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.11■□□□□ 0.81
Rbm28Q8CGC6 Gm27389-201ENSMUST00000183622 195 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms