Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Gm7367-201ENSMUST00000057611 492 ntBASIC21.04■□□□□ 0.96
Smc4Q8CG47 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.03■□□□□ 0.96
Smc4Q8CG47 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc4Q8CG47 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.02■□□□□ 0.96
Smc4Q8CG47 Gm27000-201ENSMUST00000182943 842 ntBASIC21.02■□□□□ 0.96
Smc4Q8CG47 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Gm10566-201ENSMUST00000086739 996 ntBASIC21.02■□□□□ 0.96
Smc4Q8CG47 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc4Q8CG47 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Smc4Q8CG47 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smc4Q8CG47 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.01■□□□□ 0.95
Smc4Q8CG47 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.01■□□□□ 0.95
Smc4Q8CG47 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smc4Q8CG47 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Smc4Q8CG47 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Smc4Q8CG47 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc4Q8CG47 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21■□□□□ 0.95
Smc4Q8CG47 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21■□□□□ 0.95
Smc4Q8CG47 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc4Q8CG47 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc4Q8CG47 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc4Q8CG47 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.99■□□□□ 0.95
Smc4Q8CG47 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smc4Q8CG47 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Smc4Q8CG47 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smc4Q8CG47 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms