Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gm11950-201ENSMUST00000121615 838 ntBASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gm6623-201ENSMUST00000173570 544 ntBASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gm44771-201ENSMUST00000206975 626 ntBASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc17Q8CE13 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc17Q8CE13 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc17Q8CE13 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc17Q8CE13 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc17Q8CE13 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc17Q8CE13 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.64■□□□□ 0.42
Ccdc17Q8CE13 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Gm26039-201ENSMUST00000158152 144 ntBASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Mir3081-201ENSMUST00000175305 84 ntBASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc17Q8CE13 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Gm37025-201ENSMUST00000195159 829 ntBASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc17Q8CE13 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc17Q8CE13 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.61■□□□□ 0.41
Ccdc17Q8CE13 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms