Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Gm6433-201ENSMUST00000118634 875 ntBASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc178Q8CDV0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc178Q8CDV0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc178Q8CDV0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc178Q8CDV0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Gm11539-201ENSMUST00000119837 557 ntBASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Gm13436-201ENSMUST00000120418 567 ntBASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc178Q8CDV0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc178Q8CDV0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Gm13559-201ENSMUST00000120476 863 ntBASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc178Q8CDV0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc178Q8CDV0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Gm38027-201ENSMUST00000192315 235 ntBASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc178Q8CDV0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc178Q8CDV0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms