Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vcpip1Q8CDG3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vcpip1Q8CDG3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vcpip1Q8CDG3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vcpip1Q8CDG3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Vcpip1Q8CDG3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Gm37292-201ENSMUST00000192062 758 ntBASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcpip1Q8CDG3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.32■□□□□ 0.52
Vcpip1Q8CDG3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcpip1Q8CDG3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vcpip1Q8CDG3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms