Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 AA414768-201ENSMUST00000121924 1257 ntBASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Gm18958-201ENSMUST00000174258 762 ntBASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Gm8969-201ENSMUST00000199694 526 ntBASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Gm10566-201ENSMUST00000086739 996 ntBASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Prpf31Q8CCF0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf31Q8CCF0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf31Q8CCF0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf31Q8CCF0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf31Q8CCF0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Gm6345-202ENSMUST00000180900 204 ntBASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Actl10-202ENSMUST00000226583 1501 ntBASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf31Q8CCF0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms