Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc60Q8C4J0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc60Q8C4J0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc60Q8C4J0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc60Q8C4J0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc60Q8C4J0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Gm27000-201ENSMUST00000182943 842 ntBASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc60Q8C4J0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Gm2274-201ENSMUST00000184539 609 ntBASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Gm7370-201ENSMUST00000219471 767 ntBASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc60Q8C4J0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Gm6433-201ENSMUST00000118634 875 ntBASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Gm18958-201ENSMUST00000174258 762 ntBASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc60Q8C4J0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms