Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.13■■□□□ 1.45
Usp47Q8BY87 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Usp47Q8BY87 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC24.12■■□□□ 1.45
Usp47Q8BY87 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Usp47Q8BY87 Gm29518-201ENSMUST00000190858 372 ntBASIC24.12■■□□□ 1.45
Usp47Q8BY87 Gm17808-201ENSMUST00000200859 894 ntBASIC24.12■■□□□ 1.45
Usp47Q8BY87 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Usp47Q8BY87 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Usp47Q8BY87 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Usp47Q8BY87 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Usp47Q8BY87 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC24.11■■□□□ 1.45
Usp47Q8BY87 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Usp47Q8BY87 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Gm25016-201ENSMUST00000158399 131 ntBASIC24.1■■□□□ 1.45
Usp47Q8BY87 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Usp47Q8BY87 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Cxcl14-202ENSMUST00000224801 1467 ntBASIC24.09■■□□□ 1.45
Usp47Q8BY87 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Usp47Q8BY87 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Usp47Q8BY87 Mir770-201ENSMUST00000103252 94 ntBASIC24.08■■□□□ 1.45
Usp47Q8BY87 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Usp47Q8BY87 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC24.08■■□□□ 1.45
Usp47Q8BY87 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Usp47Q8BY87 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Usp47Q8BY87 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Usp47Q8BY87 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Usp47Q8BY87 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Usp47Q8BY87 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Gm11620-201ENSMUST00000118770 1845 ntBASIC24.07■■□□□ 1.44
Usp47Q8BY87 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC24.07■■□□□ 1.44
Usp47Q8BY87 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Usp47Q8BY87 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC24.06■■□□□ 1.44
Usp47Q8BY87 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Usp47Q8BY87 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC24.06■■□□□ 1.44
Usp47Q8BY87 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Gm11950-201ENSMUST00000121615 838 ntBASIC24.05■■□□□ 1.44
Usp47Q8BY87 Gm44450-201ENSMUST00000199528 114 ntBASIC24.05■■□□□ 1.44
Usp47Q8BY87 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC24.05■■□□□ 1.44
Usp47Q8BY87 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Gm18115-201ENSMUST00000221209 621 ntBASIC24.05■■□□□ 1.44
Usp47Q8BY87 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Usp47Q8BY87 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Usp47Q8BY87 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms