Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm9013-201ENSMUST00000132939 882 ntBASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap1Q8BTW8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm26039-201ENSMUST00000158152 144 ntBASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm33142-201ENSMUST00000193913 867 ntBASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm21362-201ENSMUST00000194272 928 ntBASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap1Q8BTW8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm7367-201ENSMUST00000057611 492 ntBASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Actl10-202ENSMUST00000226583 1501 ntBASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap1Q8BTW8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm11355-201ENSMUST00000121120 306 ntBASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Gm5587-201ENSMUST00000206270 674 ntBASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap1Q8BTW8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap1Q8BTW8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdk5rap1Q8BTW8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms