Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Suds3Q8BR65 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.52■□□□□ 0.39
Suds3Q8BR65 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Suds3Q8BR65 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Suds3Q8BR65 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Suds3Q8BR65 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Suds3Q8BR65 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Gm43183-201ENSMUST00000200632 547 ntBASIC17.51■□□□□ 0.39
Suds3Q8BR65 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.51■□□□□ 0.39
Suds3Q8BR65 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Suds3Q8BR65 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.51■□□□□ 0.39
Suds3Q8BR65 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Suds3Q8BR65 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.49■□□□□ 0.39
Suds3Q8BR65 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.49■□□□□ 0.39
Suds3Q8BR65 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Gm18025-201ENSMUST00000221733 862 ntBASIC17.49■□□□□ 0.39
Suds3Q8BR65 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Suds3Q8BR65 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Gm715-201ENSMUST00000117865 831 ntBASIC17.48■□□□□ 0.39
Suds3Q8BR65 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.48■□□□□ 0.39
Suds3Q8BR65 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Suds3Q8BR65 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms