Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cpsf4Q8BQZ5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Gm10418-201ENSMUST00000100943 576 ntBASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpsf4Q8BQZ5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Gm12382-201ENSMUST00000122005 922 ntBASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.54■□□□□ 0.24
Cpsf4Q8BQZ5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Mir5122-201ENSMUST00000175004 89 ntBASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpsf4Q8BQZ5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms