Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.11■□□□□ 0.81
U2af1l4Q8BGJ9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Mir5130-201ENSMUST00000175160 84 ntBASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1l4Q8BGJ9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1l4Q8BGJ9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Gm27463-201ENSMUST00000183569 57 ntBASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Gm7461-201ENSMUST00000058918 827 ntBASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1l4Q8BGJ9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1l4Q8BGJ9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Gm7284-201ENSMUST00000131667 944 ntBASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Gm4974-201ENSMUST00000209974 875 ntBASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.07■□□□□ 0.8
U2af1l4Q8BGJ9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
U2af1l4Q8BGJ9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms