Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Gm21814-202ENSMUST00000203277 873 ntBASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Gm3375-201ENSMUST00000203929 796 ntBASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim65Q8BFW4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim65Q8BFW4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim65Q8BFW4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim65Q8BFW4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim65Q8BFW4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.24■□□□□ 0.51
Trim65Q8BFW4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Il3ra-202ENSMUST00000223589 738 ntBASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms