Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gm43575-201ENSMUST00000196420 516 ntBASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc28Q80XJ3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc28Q80XJ3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc28Q80XJ3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Gm7862-201ENSMUST00000121461 292 ntBASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc28Q80XJ3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc28Q80XJ3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ttc28Q80XJ3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ttc28Q80XJ3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc28Q80XJ3 Gm18421-201ENSMUST00000204122 625 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms