Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nrde2Q80XC6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nrde2Q80XC6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Gm11355-201ENSMUST00000121120 306 ntBASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Gm37025-201ENSMUST00000195159 829 ntBASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Gm17808-201ENSMUST00000200859 894 ntBASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nrde2Q80XC6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Gm13401-201ENSMUST00000117074 291 ntBASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Gm28033-201ENSMUST00000184224 96 ntBASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Gm9731-201ENSMUST00000209480 747 ntBASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nrde2Q80XC6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Gm7153-201ENSMUST00000117092 455 ntBASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Gm29791-202ENSMUST00000207888 369 ntBASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Gm18669-201ENSMUST00000216049 778 ntBASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nrde2Q80XC6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nrde2Q80XC6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms