Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Gm28033-201ENSMUST00000184224 96 ntBASIC16.27■□□□□ 0.2
Vrk1Q80X41 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.27■□□□□ 0.2
Vrk1Q80X41 Actl10-202ENSMUST00000226583 1501 ntBASIC16.27■□□□□ 0.2
Vrk1Q80X41 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vrk1Q80X41 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vrk1Q80X41 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vrk1Q80X41 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Vrk1Q80X41 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vrk1Q80X41 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.26■□□□□ 0.19
Vrk1Q80X41 Mir8112-201ENSMUST00000184382 131 ntBASIC16.26■□□□□ 0.19
Vrk1Q80X41 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vrk1Q80X41 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vrk1Q80X41 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.26■□□□□ 0.19
Vrk1Q80X41 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Gm18958-201ENSMUST00000174258 762 ntBASIC16.25■□□□□ 0.19
Vrk1Q80X41 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Gm18669-201ENSMUST00000216049 778 ntBASIC16.25■□□□□ 0.19
Vrk1Q80X41 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vrk1Q80X41 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Gm6623-201ENSMUST00000173570 544 ntBASIC16.24■□□□□ 0.19
Vrk1Q80X41 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.24■□□□□ 0.19
Vrk1Q80X41 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.23■□□□□ 0.19
Vrk1Q80X41 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Gm37722-201ENSMUST00000193757 208 ntBASIC16.23■□□□□ 0.19
Vrk1Q80X41 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms