Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ush1gQ80T11 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.65■□□□□ 0.58
Ush1gQ80T11 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.65■□□□□ 0.58
Ush1gQ80T11 Gm7461-201ENSMUST00000058918 827 ntBASIC18.65■□□□□ 0.58
Ush1gQ80T11 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.65■□□□□ 0.58
Ush1gQ80T11 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ush1gQ80T11 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.64■□□□□ 0.58
Ush1gQ80T11 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.64■□□□□ 0.58
Ush1gQ80T11 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ush1gQ80T11 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.64■□□□□ 0.58
Ush1gQ80T11 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ush1gQ80T11 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.64■□□□□ 0.57
Ush1gQ80T11 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.64■□□□□ 0.57
Ush1gQ80T11 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.64■□□□□ 0.57
Ush1gQ80T11 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ush1gQ80T11 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ush1gQ80T11 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Gm11950-201ENSMUST00000121615 838 ntBASIC18.62■□□□□ 0.57
Ush1gQ80T11 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.62■□□□□ 0.57
Ush1gQ80T11 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.62■□□□□ 0.57
Ush1gQ80T11 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1gQ80T11 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.61■□□□□ 0.57
Ush1gQ80T11 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Gm18958-201ENSMUST00000174258 762 ntBASIC18.61■□□□□ 0.57
Ush1gQ80T11 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1gQ80T11 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ush1gQ80T11 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.6■□□□□ 0.57
Ush1gQ80T11 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.6■□□□□ 0.57
Ush1gQ80T11 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1gQ80T11 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms