Protein–RNA interactions for Protein: Q7TQK5

Ccdc93, Coiled-coil domain-containing protein 93, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc93Q7TQK5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc93Q7TQK5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc93Q7TQK5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc93Q7TQK5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Gm18733-201ENSMUST00000173950 856 ntBASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc93Q7TQK5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc93Q7TQK5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc93Q7TQK5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc93Q7TQK5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc93Q7TQK5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Gm11452-201ENSMUST00000122376 690 ntBASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc93Q7TQK5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Gm10052-201ENSMUST00000168019 960 ntBASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Gm18195-201ENSMUST00000207604 706 ntBASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Gm7729-201ENSMUST00000050143 801 ntBASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc93Q7TQK5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc93Q7TQK5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc93Q7TQK5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc93Q7TQK5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms