Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ubfd1Q78JW9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubfd1Q78JW9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubfd1Q78JW9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.63■□□□□ 0.25
Ubfd1Q78JW9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ubfd1Q78JW9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ubfd1Q78JW9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubfd1Q78JW9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubfd1Q78JW9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubfd1Q78JW9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubfd1Q78JW9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubfd1Q78JW9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ubfd1Q78JW9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubfd1Q78JW9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.58■□□□□ 0.25
Ubfd1Q78JW9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubfd1Q78JW9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms