Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Syne1Q6ZWR6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Syne1Q6ZWR6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gm26039-201ENSMUST00000158152 144 ntBASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gm27389-201ENSMUST00000183622 195 ntBASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Olfr129-201ENSMUST00000122318 993 ntBASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 AC164629.2-201ENSMUST00000217916 270 ntBASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Gm37374-201ENSMUST00000194954 1829 ntBASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Idnk-204ENSMUST00000226010 1898 ntBASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Syne1Q6ZWR6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Syne1Q6ZWR6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms