Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Gm2651-201ENSMUST00000203560 838 ntBASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx55Q6ZPL9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Gm18421-201ENSMUST00000204122 625 ntBASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx55Q6ZPL9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx55Q6ZPL9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx55Q6ZPL9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx55Q6ZPL9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx55Q6ZPL9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Rprl3-201ENSMUST00000157400 290 ntBASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx55Q6ZPL9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Gm6296-201ENSMUST00000222599 943 ntBASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx55Q6ZPL9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx55Q6ZPL9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Gm7862-201ENSMUST00000121461 292 ntBASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Gm37935-201ENSMUST00000192012 982 ntBASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx55Q6ZPL9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.35■□□□□ 0.69
Ddx55Q6ZPL9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms