Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Six2Q62232 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Six2Q62232 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.16■□□□□ 0.5
Six2Q62232 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.16■□□□□ 0.5
Six2Q62232 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six2Q62232 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.15■□□□□ 0.5
Six2Q62232 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Six2Q62232 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six2Q62232 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Six2Q62232 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Six2Q62232 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Six2Q62232 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Six2Q62232 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Six2Q62232 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.14■□□□□ 0.5
Six2Q62232 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Six2Q62232 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Six2Q62232 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
Six2Q62232 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.14■□□□□ 0.49
Six2Q62232 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six2Q62232 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Six2Q62232 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.14■□□□□ 0.49
Six2Q62232 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.14■□□□□ 0.49
Six2Q62232 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Six2Q62232 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Six2Q62232 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.13■□□□□ 0.49
Six2Q62232 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Six2Q62232 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.13■□□□□ 0.49
Six2Q62232 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.13■□□□□ 0.49
Six2Q62232 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Six2Q62232 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six2Q62232 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.12■□□□□ 0.49
Six2Q62232 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.12■□□□□ 0.49
Six2Q62232 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.12■□□□□ 0.49
Six2Q62232 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.12■□□□□ 0.49
Six2Q62232 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six2Q62232 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Six2Q62232 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.11■□□□□ 0.49
Six2Q62232 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.11■□□□□ 0.49
Six2Q62232 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms