Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.1■□□□□ 0.81
Ctr9Q62018 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ctr9Q62018 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Gm21559-201ENSMUST00000220638 855 ntBASIC20.09■□□□□ 0.81
Ctr9Q62018 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ctr9Q62018 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ctr9Q62018 Gm8587-201ENSMUST00000076538 843 ntBASIC20.09■□□□□ 0.81
Ctr9Q62018 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ctr9Q62018 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.09■□□□□ 0.81
Ctr9Q62018 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ctr9Q62018 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ctr9Q62018 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ctr9Q62018 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ctr9Q62018 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ctr9Q62018 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Ctr9Q62018 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.08■□□□□ 0.81
Ctr9Q62018 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.08■□□□□ 0.81
Ctr9Q62018 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ctr9Q62018 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ctr9Q62018 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ctr9Q62018 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.08■□□□□ 0.8
Ctr9Q62018 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.08■□□□□ 0.8
Ctr9Q62018 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ctr9Q62018 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ctr9Q62018 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ctr9Q62018 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ctr9Q62018 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ctr9Q62018 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ctr9Q62018 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ctr9Q62018 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.07■□□□□ 0.8
Ctr9Q62018 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.07■□□□□ 0.8
Ctr9Q62018 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ctr9Q62018 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ctr9Q62018 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ctr9Q62018 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.06■□□□□ 0.8
Ctr9Q62018 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Ctr9Q62018 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.06■□□□□ 0.8
Ctr9Q62018 Gm18958-201ENSMUST00000174258 762 ntBASIC20.06■□□□□ 0.8
Ctr9Q62018 Gm27000-201ENSMUST00000182943 842 ntBASIC20.06■□□□□ 0.8
Ctr9Q62018 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ctr9Q62018 Actl10-202ENSMUST00000226583 1501 ntBASIC20.06■□□□□ 0.8
Ctr9Q62018 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ctr9Q62018 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ctr9Q62018 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.05■□□□□ 0.8
Ctr9Q62018 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctr9Q62018 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctr9Q62018 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.04■□□□□ 0.8
Ctr9Q62018 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctr9Q62018 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ctr9Q62018 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ctr9Q62018 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctr9Q62018 Gm27389-201ENSMUST00000183622 195 ntBASIC20.04■□□□□ 0.8
Ctr9Q62018 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctr9Q62018 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctr9Q62018 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms