Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd1Q61466 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Smarcd1Q61466 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Gm23634-201ENSMUST00000175071 91 ntBASIC17.77■□□□□ 0.44
Smarcd1Q61466 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcd1Q61466 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Actl10-202ENSMUST00000226583 1501 ntBASIC17.77■□□□□ 0.43
Smarcd1Q61466 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Smarcd1Q61466 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Smarcd1Q61466 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcd1Q61466 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.75■□□□□ 0.43
Smarcd1Q61466 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcd1Q61466 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.75■□□□□ 0.43
Smarcd1Q61466 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Gm26039-201ENSMUST00000158152 144 ntBASIC17.74■□□□□ 0.43
Smarcd1Q61466 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.74■□□□□ 0.43
Smarcd1Q61466 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Gm10566-201ENSMUST00000086739 996 ntBASIC17.74■□□□□ 0.43
Smarcd1Q61466 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcd1Q61466 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarcd1Q61466 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd1Q61466 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd1Q61466 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcd1Q61466 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms