Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC24.62■■□□□ 1.53
Ptch1Q61115 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC24.62■■□□□ 1.53
Ptch1Q61115 Gm44430-201ENSMUST00000203376 995 ntBASIC24.62■■□□□ 1.53
Ptch1Q61115 Gm43935-201ENSMUST00000203569 1050 ntBASIC24.62■■□□□ 1.53
Ptch1Q61115 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ptch1Q61115 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 Gm38342-201ENSMUST00000195710 2980 ntBASIC24.62■■□□□ 1.53
Ptch1Q61115 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Ptch1Q61115 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC24.62■■□□□ 1.53
Ptch1Q61115 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptch1Q61115 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ptch1Q61115 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ptch1Q61115 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC24.61■■□□□ 1.53
Ptch1Q61115 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Rbfox2-207ENSMUST00000227533 1041 ntBASIC24.61■■□□□ 1.53
Ptch1Q61115 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Zfp264-201ENSMUST00000208656 1563 ntBASIC24.61■■□□□ 1.53
Ptch1Q61115 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC24.61■■□□□ 1.53
Ptch1Q61115 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptch1Q61115 Gm10175-201ENSMUST00000086013 645 ntBASIC24.61■■□□□ 1.53
Ptch1Q61115 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptch1Q61115 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptch1Q61115 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptch1Q61115 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptch1Q61115 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Gm9727-201ENSMUST00000161387 555 ntBASIC24.6■■□□□ 1.53
Ptch1Q61115 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC24.6■■□□□ 1.53
Ptch1Q61115 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ptch1Q61115 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Ptch1Q61115 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Ptch1Q61115 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ptch1Q61115 Gm7506-201ENSMUST00000207758 815 ntBASIC24.59■■□□□ 1.53
Ptch1Q61115 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC24.59■■□□□ 1.53
Ptch1Q61115 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ptch1Q61115 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ptch1Q61115 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ptch1Q61115 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Ptch1Q61115 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
Ptch1Q61115 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC24.58■■□□□ 1.53
Ptch1Q61115 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ptch1Q61115 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ptch1Q61115 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ptch1Q61115 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ptch1Q61115 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ptch1Q61115 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ptch1Q61115 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Ptch1Q61115 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptch1Q61115 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptch1Q61115 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptch1Q61115 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptch1Q61115 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptch1Q61115 Gm25745-201ENSMUST00000174945 133 ntBASIC24.57■■□□□ 1.52
Ptch1Q61115 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC24.57■■□□□ 1.52
Ptch1Q61115 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC24.57■■□□□ 1.52
Ptch1Q61115 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptch1Q61115 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptch1Q61115 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptch1Q61115 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ptch1Q61115 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC24.56■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms