Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Sdf4Q61112 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.3■□□□□ 0.36
Sdf4Q61112 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Sdf4Q61112 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sdf4Q61112 Gm27463-201ENSMUST00000183569 57 ntBASIC17.29■□□□□ 0.36
Sdf4Q61112 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Sdf4Q61112 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sdf4Q61112 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdf4Q61112 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Sdf4Q61112 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sdf4Q61112 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.28■□□□□ 0.36
Sdf4Q61112 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.28■□□□□ 0.36
Sdf4Q61112 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdf4Q61112 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Sdf4Q61112 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Sdf4Q61112 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sdf4Q61112 Gm37055-201ENSMUST00000191866 133 ntBASIC17.27■□□□□ 0.36
Sdf4Q61112 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Gm5417-201ENSMUST00000079706 384 ntBASIC17.27■□□□□ 0.36
Sdf4Q61112 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdf4Q61112 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.27■□□□□ 0.35
Sdf4Q61112 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdf4Q61112 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdf4Q61112 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdf4Q61112 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sdf4Q61112 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sdf4Q61112 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.26■□□□□ 0.35
Sdf4Q61112 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.26■□□□□ 0.35
Sdf4Q61112 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.26■□□□□ 0.35
Sdf4Q61112 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sdf4Q61112 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sdf4Q61112 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdf4Q61112 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms