Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.47■□□□□ 0.39
Slc6a4Q60857 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Gm21362-201ENSMUST00000194272 928 ntBASIC17.46■□□□□ 0.39
Slc6a4Q60857 Gm5587-201ENSMUST00000206270 674 ntBASIC17.46■□□□□ 0.39
Slc6a4Q60857 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a4Q60857 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Gm11355-201ENSMUST00000121120 306 ntBASIC17.45■□□□□ 0.38
Slc6a4Q60857 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.45■□□□□ 0.38
Slc6a4Q60857 Gm33142-201ENSMUST00000193913 867 ntBASIC17.45■□□□□ 0.38
Slc6a4Q60857 Gm7367-201ENSMUST00000057611 492 ntBASIC17.45■□□□□ 0.38
Slc6a4Q60857 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a4Q60857 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.44■□□□□ 0.38
Slc6a4Q60857 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Gm25016-201ENSMUST00000158399 131 ntBASIC17.44■□□□□ 0.38
Slc6a4Q60857 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.44■□□□□ 0.38
Slc6a4Q60857 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a4Q60857 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.43■□□□□ 0.38
Slc6a4Q60857 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Gm9013-201ENSMUST00000132939 882 ntBASIC17.43■□□□□ 0.38
Slc6a4Q60857 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a4Q60857 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.43■□□□□ 0.38
Slc6a4Q60857 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a4Q60857 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Gm10819-201ENSMUST00000099988 561 ntBASIC17.42■□□□□ 0.38
Slc6a4Q60857 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms