Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim38Q5SZ99 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Gm9731-201ENSMUST00000209480 747 ntBASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.68■□□□□ 0.42
Trim38Q5SZ99 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim38Q5SZ99 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim38Q5SZ99 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Gm38027-201ENSMUST00000192315 235 ntBASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim38Q5SZ99 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Gm12085-201ENSMUST00000119263 940 ntBASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Timm23-208ENSMUST00000226683 750 ntBASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim38Q5SZ99 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim38Q5SZ99 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms