Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Gm29791-202ENSMUST00000207888 369 ntBASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Gm9847-201ENSMUST00000052528 599 ntBASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav7d-4Q5R1H9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7d-4Q5R1H9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Rps24-207ENSMUST00000224568 714 ntBASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms