Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn2bQ56A07 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn2bQ56A07 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.9■□□□□ 0.3
Scn2bQ56A07 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.9■□□□□ 0.3
Scn2bQ56A07 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.9■□□□□ 0.3
Scn2bQ56A07 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.9■□□□□ 0.3
Scn2bQ56A07 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.9■□□□□ 0.3
Scn2bQ56A07 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2bQ56A07 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn2bQ56A07 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn2bQ56A07 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.89■□□□□ 0.29
Scn2bQ56A07 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Gm5643-201ENSMUST00000117081 966 ntBASIC16.89■□□□□ 0.29
Scn2bQ56A07 Gm6576-201ENSMUST00000169678 883 ntBASIC16.89■□□□□ 0.29
Scn2bQ56A07 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2bQ56A07 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Scn2bQ56A07 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn2bQ56A07 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.86■□□□□ 0.29
Scn2bQ56A07 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Gm10812-201ENSMUST00000099864 546 ntBASIC16.86■□□□□ 0.29
Scn2bQ56A07 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.86■□□□□ 0.29
Scn2bQ56A07 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn2bQ56A07 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn2bQ56A07 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn2bQ56A07 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn2bQ56A07 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms