Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.1□□□□□ -0.15
Znf48Q3US17 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Znf48Q3US17 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Znf48Q3US17 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Znf48Q3US17 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Znf48Q3US17 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Znf48Q3US17 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Znf48Q3US17 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.09□□□□□ -0.15
Znf48Q3US17 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.09□□□□□ -0.15
Znf48Q3US17 Gm10517-202ENSMUST00000192970 758 ntBASIC14.09□□□□□ -0.15
Znf48Q3US17 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Znf48Q3US17 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.09□□□□□ -0.15
Znf48Q3US17 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.09□□□□□ -0.15
Znf48Q3US17 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Znf48Q3US17 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.09□□□□□ -0.15
Znf48Q3US17 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.09□□□□□ -0.15
Znf48Q3US17 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.09□□□□□ -0.15
Znf48Q3US17 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Znf48Q3US17 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Znf48Q3US17 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Znf48Q3US17 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Znf48Q3US17 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Znf48Q3US17 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.08□□□□□ -0.15
Znf48Q3US17 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Znf48Q3US17 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Znf48Q3US17 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.08□□□□□ -0.16
Znf48Q3US17 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Znf48Q3US17 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.08□□□□□ -0.16
Znf48Q3US17 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Gm42545-201ENSMUST00000202755 922 ntBASIC14.08□□□□□ -0.16
Znf48Q3US17 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.08□□□□□ -0.16
Znf48Q3US17 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Znf48Q3US17 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.08□□□□□ -0.16
Znf48Q3US17 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Znf48Q3US17 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.08□□□□□ -0.16
Znf48Q3US17 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Znf48Q3US17 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Znf48Q3US17 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.07□□□□□ -0.16
Znf48Q3US17 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Znf48Q3US17 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.07□□□□□ -0.16
Znf48Q3US17 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.07□□□□□ -0.16
Znf48Q3US17 Gm18025-201ENSMUST00000221733 862 ntBASIC14.07□□□□□ -0.16
Znf48Q3US17 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.07□□□□□ -0.16
Znf48Q3US17 Timm23-208ENSMUST00000226683 750 ntBASIC14.07□□□□□ -0.16
Znf48Q3US17 Odf3b-204ENSMUST00000227834 930 ntBASIC14.07□□□□□ -0.16
Znf48Q3US17 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.07□□□□□ -0.16
Znf48Q3US17 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Znf48Q3US17 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Znf48Q3US17 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Znf48Q3US17 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.06□□□□□ -0.16
Znf48Q3US17 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Znf48Q3US17 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Gm23634-201ENSMUST00000175071 91 ntBASIC14.06□□□□□ -0.16
Znf48Q3US17 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Gm10138-203ENSMUST00000206952 366 ntBASIC14.06□□□□□ -0.16
Znf48Q3US17 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Znf48Q3US17 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms