Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp560Q3URI6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.09■□□□□ 0.33
Zfp560Q3URI6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.09■□□□□ 0.33
Zfp560Q3URI6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp560Q3URI6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zfp560Q3URI6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Zfp560Q3URI6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Zfp560Q3URI6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp560Q3URI6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Gm15565-201ENSMUST00000118890 427 ntBASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp560Q3URI6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms