Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Naf1Q3UMQ8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Naf1Q3UMQ8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Gm33142-201ENSMUST00000193913 867 ntBASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Naf1Q3UMQ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Actl10-202ENSMUST00000226583 1501 ntBASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Naf1Q3UMQ8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.31■□□□□ 0.36
Naf1Q3UMQ8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms