Protein–RNA interactions for Protein: Q3UM89

Foxr2, Forkhead box protein R2, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr2Q3UM89 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxr2Q3UM89 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Haglr-201ENSMUST00000100000 2085 ntBASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxr2Q3UM89 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.14■□□□□ 0.01
Foxr2Q3UM89 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxr2Q3UM89 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Gm18958-201ENSMUST00000174258 762 ntBASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxr2Q3UM89 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Foxr2Q3UM89 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxr2Q3UM89 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms