Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Spg11Q3UHA3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Gm14127-201ENSMUST00000117906 678 ntBASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Gm29791-202ENSMUST00000207888 369 ntBASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Spg11Q3UHA3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Spg11Q3UHA3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Spg11Q3UHA3 Gm11764-201ENSMUST00000120221 623 ntBASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Spg11Q3UHA3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Spg11Q3UHA3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms