Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lins1Q3U1D0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lins1Q3U1D0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Lins1Q3U1D0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lins1Q3U1D0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lins1Q3U1D0 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lins1Q3U1D0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Lins1Q3U1D0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lins1Q3U1D0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lins1Q3U1D0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lins1Q3U1D0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms