Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdnep1Q3TP92 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdnep1Q3TP92 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdnep1Q3TP92 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.65■□□□□ 0.74
Ctdnep1Q3TP92 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdnep1Q3TP92 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms