Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc4Q3TCX3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Idnk-204ENSMUST00000226010 1898 ntBASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc4Q3TCX3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc4Q3TCX3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms